Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 DGCR5-201ENST00000399539 862 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.24■□□□□ 0.19
ATXN3P54252 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 RPS2P32-201ENST00000439199 892 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 RN7SL618P-201ENST00000477850 296 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 RAB43P1-201ENST00000561790 589 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.24■□□□□ 0.19
ATXN3P54252 AC010336.2-201ENST00000564226 506 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 AC104794.3-201ENST00000566840 1248 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 AC105021.1-202ENST00000570572 669 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 AL844908.2-201ENST00000609461 460 ntBASIC16.24■□□□□ 0.19
ATXN3P54252 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.24■□□□□ 0.19
ATXN3P54252 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATXN3P54252 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.24■□□□□ 0.19
ATXN3P54252 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
ATXN3P54252 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ATXN3P54252 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.23■□□□□ 0.19
ATXN3P54252 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.23■□□□□ 0.19
ATXN3P54252 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.23■□□□□ 0.19
ATXN3P54252 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 AC092384.3-202ENST00000564646 2873 ntBASIC16.23■□□□□ 0.19
ATXN3P54252 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 FAM220BP-201ENST00000377689 816 ntBASIC16.23■□□□□ 0.19
ATXN3P54252 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.23■□□□□ 0.19
ATXN3P54252 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.23■□□□□ 0.19
ATXN3P54252 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATXN3P54252 GNAQP1-201ENST00000444815 1067 ntBASIC16.23■□□□□ 0.19
ATXN3P54252 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 AC093004.1-201ENST00000508850 424 ntBASIC16.23■□□□□ 0.19
ATXN3P54252 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ATXN3P54252 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.23■□□□□ 0.19
ATXN3P54252 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ATXN3P54252 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 IGHV3-72-202ENST00000621503 303 ntBASIC16.23■□□□□ 0.19
ATXN3P54252 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.23■□□□□ 0.19
ATXN3P54252 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATXN3P54252 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.23■□□□□ 0.19
ATXN3P54252 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATXN3P54252 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.22■□□□□ 0.19
ATXN3P54252 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATXN3P54252 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATXN3P54252 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms