Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-5P52952 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-5P52952 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.47□□□□□ -0.25
NKX2-5P52952 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-5P52952 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-5P52952 AD001527.2-201ENST00000622994 785 ntBASIC13.47□□□□□ -0.25
NKX2-5P52952 AL023875.1-201ENST00000640777 796 ntBASIC13.47□□□□□ -0.25
NKX2-5P52952 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-5P52952 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-5P52952 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-5P52952 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-5P52952 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.47□□□□□ -0.25
NKX2-5P52952 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-5P52952 AL731571.1-201ENST00000617058 5428 ntBASIC13.46□□□□□ -0.25
NKX2-5P52952 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 VENTXP1-201ENST00000569334 2716 ntBASIC13.46□□□□□ -0.25
NKX2-5P52952 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 SLC29A4P1-201ENST00000398760 971 ntBASIC13.46□□□□□ -0.25
NKX2-5P52952 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-5P52952 FAM8A3P-201ENST00000427218 844 ntBASIC13.46□□□□□ -0.25
NKX2-5P52952 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-5P52952 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-5P52952 AC083906.2-201ENST00000511578 360 ntBASIC13.46□□□□□ -0.25
NKX2-5P52952 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-5P52952 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-5P52952 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NKX2-5P52952 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-5P52952 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-5P52952 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-5P52952 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-5P52952 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.46□□□□□ -0.26
NKX2-5P52952 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-5P52952 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-5P52952 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-5P52952 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
NKX2-5P52952 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-5P52952 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
NKX2-5P52952 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NKX2-5P52952 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-5P52952 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-5P52952 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-5P52952 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.45□□□□□ -0.26
NKX2-5P52952 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX2-5P52952 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-5P52952 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-5P52952 AC097374.2-201ENST00000618617 1306 ntBASIC13.45□□□□□ -0.26
NKX2-5P52952 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-5P52952 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-5P52952 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms