Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.12□□□□□ -0.15
SRP9P49458 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 LINC01144-201ENST00000626198 1710 ntBASIC14.12□□□□□ -0.15
SRP9P49458 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 AC007191.1-201ENST00000623179 2995 ntBASIC14.12□□□□□ -0.15
SRP9P49458 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SRP9P49458 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 MIR648-201ENST00000385046 94 ntBASIC14.11□□□□□ -0.15
SRP9P49458 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 KRT18P13-201ENST00000400056 1290 ntBASIC14.11□□□□□ -0.15
SRP9P49458 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.11□□□□□ -0.15
SRP9P49458 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.11□□□□□ -0.15
SRP9P49458 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 KRT18P34-201ENST00000488218 1270 ntBASIC14.11□□□□□ -0.15
SRP9P49458 FAM86C2P-203ENST00000528684 1004 ntBASIC14.11□□□□□ -0.15
SRP9P49458 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
SRP9P49458 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 AC087481.3-201ENST00000602886 1894 ntBASIC14.11□□□□□ -0.15
SRP9P49458 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 LINC00552-201ENST00000625151 2579 ntBASIC14.11□□□□□ -0.15
SRP9P49458 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.11□□□□□ -0.15
SRP9P49458 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.11□□□□□ -0.15
SRP9P49458 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRP9P49458 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SRP9P49458 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 HTR5BP-201ENST00000430851 1154 ntBASIC14.1□□□□□ -0.15
SRP9P49458 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.1□□□□□ -0.15
SRP9P49458 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.1□□□□□ -0.15
SRP9P49458 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.1□□□□□ -0.15
SRP9P49458 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.1□□□□□ -0.15
SRP9P49458 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.1□□□□□ -0.15
SRP9P49458 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.1□□□□□ -0.15
SRP9P49458 AL078644.1-201ENST00000609881 752 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms