Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC9A3P48764 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SLC9A3P48764 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC9A3P48764 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 ZNF259P1-201ENST00000407656 1365 ntBASIC14.59□□□□□ -0.07
SLC9A3P48764 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC9A3P48764 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC9A3P48764 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC9A3P48764 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC9A3P48764 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
SLC9A3P48764 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.58□□□□□ -0.07
SLC9A3P48764 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.58□□□□□ -0.07
SLC9A3P48764 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.58□□□□□ -0.07
SLC9A3P48764 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.58□□□□□ -0.07
SLC9A3P48764 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC9A3P48764 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC9A3P48764 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC9A3P48764 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SLC9A3P48764 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC9A3P48764 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC9A3P48764 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 AL591424.1-201ENST00000442569 1213 ntBASIC14.58□□□□□ -0.08
SLC9A3P48764 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 RNA5SP416-201ENST00000516838 111 ntBASIC14.58□□□□□ -0.08
SLC9A3P48764 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC9A3P48764 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC9A3P48764 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC9A3P48764 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC9A3P48764 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC9A3P48764 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 AKAP8P1-201ENST00000434743 1349 ntBASIC14.58□□□□□ -0.08
SLC9A3P48764 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC9A3P48764 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC9A3P48764 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.58□□□□□ -0.08
SLC9A3P48764 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.58□□□□□ -0.08
SLC9A3P48764 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC9A3P48764 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC9A3P48764 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC9A3P48764 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC9A3P48764 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC9A3P48764 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SLC9A3P48764 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SLC9A3P48764 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC9A3P48764 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SLC9A3P48764 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC9A3P48764 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
SLC9A3P48764 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC9A3P48764 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC9A3P48764 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms