Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
BRCC3P46736 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.73■□□□□ 0.27
BRCC3P46736 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.73■□□□□ 0.27
BRCC3P46736 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.73■□□□□ 0.27
BRCC3P46736 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.73■□□□□ 0.27
BRCC3P46736 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 AC234783.1-201ENST00000441761 496 ntBASIC16.73■□□□□ 0.27
BRCC3P46736 AC119751.2-201ENST00000504529 210 ntBASIC16.73■□□□□ 0.27
BRCC3P46736 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.73■□□□□ 0.27
BRCC3P46736 CLUHP6-201ENST00000580789 941 ntBASIC16.73■□□□□ 0.27
BRCC3P46736 AC233724.13-201ENST00000598383 410 ntBASIC16.73■□□□□ 0.27
BRCC3P46736 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BRCC3P46736 MIR6775-201ENST00000617557 69 ntBASIC16.73■□□□□ 0.27
BRCC3P46736 MIR6752-201ENST00000618442 71 ntBASIC16.73■□□□□ 0.27
BRCC3P46736 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRCC3P46736 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 ANKRD19P-201ENST00000338192 862 ntBASIC16.72■□□□□ 0.27
BRCC3P46736 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
BRCC3P46736 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
BRCC3P46736 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
BRCC3P46736 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.72■□□□□ 0.27
BRCC3P46736 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.72■□□□□ 0.27
BRCC3P46736 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.72■□□□□ 0.27
BRCC3P46736 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.72■□□□□ 0.27
BRCC3P46736 AC015910.1-201ENST00000579400 975 ntBASIC16.72■□□□□ 0.27
BRCC3P46736 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.72■□□□□ 0.27
BRCC3P46736 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.72■□□□□ 0.27
BRCC3P46736 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.72■□□□□ 0.27
BRCC3P46736 MIR6805-201ENST00000615055 62 ntBASIC16.72■□□□□ 0.27
BRCC3P46736 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.72■□□□□ 0.27
BRCC3P46736 MSTO2P-201ENST00000314835 1709 ntBASIC16.72■□□□□ 0.27
BRCC3P46736 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BRCC3P46736 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BRCC3P46736 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRCC3P46736 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 DRD5P1-201ENST00000456605 1438 ntBASIC16.71■□□□□ 0.27
BRCC3P46736 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.71■□□□□ 0.27
BRCC3P46736 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.71■□□□□ 0.27
BRCC3P46736 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.71■□□□□ 0.27
BRCC3P46736 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRCC3P46736 AL133267.1-201ENST00000398220 340 ntBASIC16.71■□□□□ 0.27
BRCC3P46736 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.71■□□□□ 0.27
BRCC3P46736 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms