Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MDH1P40925 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.93■□□□□ 0.14
MDH1P40925 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.93■□□□□ 0.14
MDH1P40925 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
MDH1P40925 AC073508.3-201ENST00000619697 1419 ntBASIC15.93■□□□□ 0.14
MDH1P40925 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.93■□□□□ 0.14
MDH1P40925 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MDH1P40925 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MDH1P40925 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MDH1P40925 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
MDH1P40925 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.92■□□□□ 0.14
MDH1P40925 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.92■□□□□ 0.14
MDH1P40925 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.92■□□□□ 0.14
MDH1P40925 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 AL359881.3-201ENST00000602640 1721 ntBASIC15.92■□□□□ 0.14
MDH1P40925 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 AC113347.1-201ENST00000413321 391 ntBASIC15.92■□□□□ 0.14
MDH1P40925 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.92■□□□□ 0.14
MDH1P40925 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.92■□□□□ 0.14
MDH1P40925 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 AC012569.1-201ENST00000591191 1524 ntBASIC15.92■□□□□ 0.14
MDH1P40925 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.92■□□□□ 0.14
MDH1P40925 MTHFR-210ENST00000641407 2387 ntBASIC15.92■□□□□ 0.14
MDH1P40925 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.92■□□□□ 0.14
MDH1P40925 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.92■□□□□ 0.14
MDH1P40925 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MDH1P40925 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.91■□□□□ 0.14
MDH1P40925 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MDH1P40925 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MDH1P40925 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MDH1P40925 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 WASH3P-207ENST00000560956 1394 ntBASIC15.91■□□□□ 0.14
MDH1P40925 FO538757.1-201ENST00000623083 1397 ntBASIC15.91■□□□□ 0.14
MDH1P40925 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.91■□□□□ 0.14
MDH1P40925 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 AK4P3-201ENST00000418260 669 ntBASIC15.91■□□□□ 0.14
MDH1P40925 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.91■□□□□ 0.14
MDH1P40925 AL671277.2-201ENST00000458060 996 ntBASIC15.91■□□□□ 0.14
MDH1P40925 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
MDH1P40925 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
MDH1P40925 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.91■□□□□ 0.14
MDH1P40925 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.91■□□□□ 0.14
MDH1P40925 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 AC133561.5-201ENST00000635547 218 ntBASIC15.91■□□□□ 0.14
MDH1P40925 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 AC113367.3-201ENST00000508316 1912 ntBASIC15.91■□□□□ 0.14
MDH1P40925 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.91■□□□□ 0.14
MDH1P40925 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
MDH1P40925 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MDH1P40925 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms