Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.86□□□□□ -0.19
GDNFP39905 AC093909.1-201ENST00000504731 1122 ntBASIC13.86□□□□□ -0.19
GDNFP39905 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 MIR4751-201ENST00000578027 74 ntBASIC13.86□□□□□ -0.19
GDNFP39905 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.86□□□□□ -0.19
GDNFP39905 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.86□□□□□ -0.19
GDNFP39905 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
GDNFP39905 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.86□□□□□ -0.19
GDNFP39905 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDNFP39905 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GDNFP39905 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
GDNFP39905 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.85□□□□□ -0.19
GDNFP39905 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GDNFP39905 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 MROH4P-201ENST00000431302 1578 ntBASIC13.85□□□□□ -0.19
GDNFP39905 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GDNFP39905 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.85□□□□□ -0.19
GDNFP39905 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GDNFP39905 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GDNFP39905 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.85□□□□□ -0.19
GDNFP39905 AP001350.2-201ENST00000625104 1094 ntBASIC13.85□□□□□ -0.19
GDNFP39905 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GDNFP39905 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GDNFP39905 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.85□□□□□ -0.19
GDNFP39905 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDNFP39905 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 AC011477.6-201ENST00000604980 1927 ntBASIC13.84□□□□□ -0.19
GDNFP39905 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 FGD5P1-202ENST00000614866 2498 ntBASIC13.84□□□□□ -0.19
GDNFP39905 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.84□□□□□ -0.19
GDNFP39905 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.84□□□□□ -0.19
GDNFP39905 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.84□□□□□ -0.19
GDNFP39905 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GDNFP39905 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GDNFP39905 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GDNFP39905 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.83□□□□□ -0.19
GDNFP39905 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.83□□□□□ -0.19
GDNFP39905 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms