Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AL080243.2-201ENST00000418783 582 ntBASIC16.71■□□□□ 0.27
CHKAP35790 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.71■□□□□ 0.27
CHKAP35790 SERBP1P3-201ENST00000459980 809 ntBASIC16.71■□□□□ 0.27
CHKAP35790 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.71■□□□□ 0.27
CHKAP35790 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.71■□□□□ 0.27
CHKAP35790 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.71■□□□□ 0.27
CHKAP35790 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.71■□□□□ 0.27
CHKAP35790 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
CHKAP35790 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHKAP35790 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHKAP35790 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.71■□□□□ 0.27
CHKAP35790 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
CHKAP35790 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHKAP35790 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHKAP35790 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHKAP35790 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.7■□□□□ 0.26
CHKAP35790 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 CICP13-201ENST00000422015 2789 ntBASIC16.7■□□□□ 0.26
CHKAP35790 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.7■□□□□ 0.26
CHKAP35790 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CHKAP35790 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.7■□□□□ 0.26
CHKAP35790 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CHKAP35790 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.7■□□□□ 0.26
CHKAP35790 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 KRT8P12-202ENST00000472924 1397 ntBASIC16.7■□□□□ 0.26
CHKAP35790 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.7■□□□□ 0.26
CHKAP35790 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.7■□□□□ 0.26
CHKAP35790 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.7■□□□□ 0.26
CHKAP35790 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.7■□□□□ 0.26
CHKAP35790 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.7■□□□□ 0.26
CHKAP35790 SPDYE17-201ENST00000412399 783 ntBASIC16.7■□□□□ 0.26
CHKAP35790 MRPS18AP1-201ENST00000414458 589 ntBASIC16.7■□□□□ 0.26
CHKAP35790 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.7■□□□□ 0.26
CHKAP35790 COX20P2-201ENST00000452636 358 ntBASIC16.7■□□□□ 0.26
CHKAP35790 AC009477.1-201ENST00000452936 217 ntBASIC16.7■□□□□ 0.26
CHKAP35790 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.7■□□□□ 0.26
CHKAP35790 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
CHKAP35790 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.7■□□□□ 0.26
CHKAP35790 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.7■□□□□ 0.26
CHKAP35790 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.7■□□□□ 0.26
CHKAP35790 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.7■□□□□ 0.26
CHKAP35790 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHKAP35790 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.69■□□□□ 0.26
CHKAP35790 AL136379.1-201ENST00000623471 2642 ntBASIC16.69■□□□□ 0.26
CHKAP35790 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.69■□□□□ 0.26
CHKAP35790 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 LINC02228-204ENST00000642115 2962 ntBASIC16.69■□□□□ 0.26
CHKAP35790 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.69■□□□□ 0.26
CHKAP35790 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
CHKAP35790 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.69■□□□□ 0.26
CHKAP35790 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHKAP35790 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.69■□□□□ 0.26
CHKAP35790 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.69■□□□□ 0.26
CHKAP35790 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.69■□□□□ 0.26
CHKAP35790 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CHKAP35790 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHKAP35790 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.69■□□□□ 0.26
CHKAP35790 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.69■□□□□ 0.26
CHKAP35790 AC020658.6-201ENST00000623564 1870 ntBASIC16.69■□□□□ 0.26
CHKAP35790 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKAP35790 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.69■□□□□ 0.26
CHKAP35790 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.69■□□□□ 0.26
CHKAP35790 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.68■□□□□ 0.26
CHKAP35790 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms