Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.36□□□□□ -0.11
SFTPDP35247 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 AC087499.5-201ENST00000452760 1342 ntBASIC14.36□□□□□ -0.11
SFTPDP35247 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.36□□□□□ -0.11
SFTPDP35247 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SFTPDP35247 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 AL161772.1-201ENST00000610494 4412 ntBASIC14.35□□□□□ -0.11
SFTPDP35247 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.35□□□□□ -0.11
SFTPDP35247 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.35□□□□□ -0.11
SFTPDP35247 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.35□□□□□ -0.11
SFTPDP35247 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 RNA5SP421-201ENST00000516864 134 ntBASIC14.35□□□□□ -0.11
SFTPDP35247 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 AC011467.4-201ENST00000594891 528 ntBASIC14.35□□□□□ -0.11
SFTPDP35247 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.35□□□□□ -0.11
SFTPDP35247 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SFTPDP35247 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SFTPDP35247 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SFTPDP35247 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPDP35247 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 HIST3H2BA-201ENST00000436555 524 ntBASIC14.34□□□□□ -0.11
SFTPDP35247 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPDP35247 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPDP35247 AC010336.2-201ENST00000564226 506 ntBASIC14.34□□□□□ -0.11
SFTPDP35247 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPDP35247 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPDP35247 AL844908.2-201ENST00000609461 460 ntBASIC14.34□□□□□ -0.11
SFTPDP35247 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SFTPDP35247 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SFTPDP35247 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SFTPDP35247 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SFTPDP35247 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms