Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
MMP11P24347 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MMP11P24347 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.03■□□□□ -0
MMP11P24347 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP11P24347 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP11P24347 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MMP11P24347 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP11P24347 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.03■□□□□ -0
MMP11P24347 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.02■□□□□ -0
MMP11P24347 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.02■□□□□ -0
MMP11P24347 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
MMP11P24347 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
MMP11P24347 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.02■□□□□ -0
MMP11P24347 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
MMP11P24347 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.02■□□□□ -0
MMP11P24347 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.02■□□□□ -0
MMP11P24347 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.02■□□□□ -0
MMP11P24347 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.02■□□□□ -0
MMP11P24347 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.02■□□□□ -0
MMP11P24347 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.02■□□□□ -0
MMP11P24347 SRD5A3P1-201ENST00000603021 949 ntBASIC15.02■□□□□ -0
MMP11P24347 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MMP11P24347 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.02■□□□□ -0
MMP11P24347 AC004461.2-201ENST00000629517 803 ntBASIC15.02■□□□□ -0
MMP11P24347 AL109936.8-201ENST00000641772 604 ntBASIC15.02■□□□□ -0
MMP11P24347 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MMP11P24347 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
MMP11P24347 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.02□□□□□ -0.01
MMP11P24347 AC073347.1-201ENST00000421633 2643 ntBASIC15.02□□□□□ -0.01
MMP11P24347 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP11P24347 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.02□□□□□ -0.01
MMP11P24347 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.02□□□□□ -0.01
MMP11P24347 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.02□□□□□ -0.01
MMP11P24347 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP11P24347 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP11P24347 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
MMP11P24347 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.02□□□□□ -0.01
MMP11P24347 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MMP11P24347 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
MMP11P24347 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 AC004987.2-201ENST00000395959 1148 ntBASIC15.01□□□□□ -0.01
MMP11P24347 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 MEP1AP4-201ENST00000423244 1087 ntBASIC15.01□□□□□ -0.01
MMP11P24347 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.01□□□□□ -0.01
MMP11P24347 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.01□□□□□ -0.01
MMP11P24347 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
MMP11P24347 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.01□□□□□ -0.01
MMP11P24347 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.01□□□□□ -0.01
MMP11P24347 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
MMP11P24347 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MMP11P24347 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms