Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP8P22894 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MMP8P22894 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.59■□□□□ 0.25
MMP8P22894 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.59■□□□□ 0.25
MMP8P22894 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.59■□□□□ 0.25
MMP8P22894 KRT18P64-201ENST00000434946 1219 ntBASIC16.59■□□□□ 0.25
MMP8P22894 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.59■□□□□ 0.25
MMP8P22894 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.59■□□□□ 0.25
MMP8P22894 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.59■□□□□ 0.25
MMP8P22894 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP8P22894 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MMP8P22894 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.59■□□□□ 0.25
MMP8P22894 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP8P22894 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.59■□□□□ 0.25
MMP8P22894 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MMP8P22894 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MMP8P22894 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MMP8P22894 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.58■□□□□ 0.25
MMP8P22894 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.58■□□□□ 0.25
MMP8P22894 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.58■□□□□ 0.25
MMP8P22894 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.58■□□□□ 0.25
MMP8P22894 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MMP8P22894 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MMP8P22894 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
MMP8P22894 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
MMP8P22894 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP8P22894 TREML5P-201ENST00000421694 576 ntBASIC16.58■□□□□ 0.24
MMP8P22894 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP8P22894 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP8P22894 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
MMP8P22894 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 ZNF890P-202ENST00000530367 1156 ntBASIC16.58■□□□□ 0.24
MMP8P22894 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.58■□□□□ 0.24
MMP8P22894 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 AC074044.1-201ENST00000609673 707 ntBASIC16.58■□□□□ 0.24
MMP8P22894 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MMP8P22894 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MMP8P22894 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
MMP8P22894 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP8P22894 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP8P22894 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP8P22894 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP8P22894 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP8P22894 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP8P22894 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP8P22894 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.57■□□□□ 0.24
MMP8P22894 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms