Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
NTF3P20783 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
NTF3P20783 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
NTF3P20783 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.12□□□□□ -0.47
NTF3P20783 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 MIR648-201ENST00000385046 94 ntBASIC12.12□□□□□ -0.47
NTF3P20783 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 AC091607.1-201ENST00000490318 1060 ntBASIC12.12□□□□□ -0.47
NTF3P20783 MIR4492-201ENST00000581627 80 ntBASIC12.12□□□□□ -0.47
NTF3P20783 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.12□□□□□ -0.47
NTF3P20783 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.12□□□□□ -0.47
NTF3P20783 AP000867.4-201ENST00000641616 219 ntBASIC12.12□□□□□ -0.47
NTF3P20783 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.12□□□□□ -0.47
NTF3P20783 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NTF3P20783 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 SIGLEC16-201ENST00000599858 1437 ntBASIC12.11□□□□□ -0.47
NTF3P20783 AC073508.3-201ENST00000619697 1419 ntBASIC12.11□□□□□ -0.47
NTF3P20783 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.11□□□□□ -0.47
NTF3P20783 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NTF3P20783 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 AC091951.1-201ENST00000512854 2465 ntBASIC12.11□□□□□ -0.47
NTF3P20783 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.11□□□□□ -0.47
NTF3P20783 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NTF3P20783 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.11□□□□□ -0.47
NTF3P20783 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.11□□□□□ -0.47
NTF3P20783 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.11□□□□□ -0.47
NTF3P20783 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 MPDU1-223ENST00000582151 728 ntBASIC12.11□□□□□ -0.47
NTF3P20783 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.11□□□□□ -0.47
NTF3P20783 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.11□□□□□ -0.47
NTF3P20783 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.11□□□□□ -0.47
NTF3P20783 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NTF3P20783 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.11□□□□□ -0.47
NTF3P20783 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms