Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.99■□□□□ 0.31
CD58P19256 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.99■□□□□ 0.31
CD58P19256 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 AL844908.2-201ENST00000609461 460 ntBASIC16.99■□□□□ 0.31
CD58P19256 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CD58P19256 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CD58P19256 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.99■□□□□ 0.31
CD58P19256 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CD58P19256 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.99■□□□□ 0.31
CD58P19256 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD58P19256 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.98■□□□□ 0.31
CD58P19256 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.98■□□□□ 0.31
CD58P19256 AL607033.1-201ENST00000623900 1599 ntBASIC16.98■□□□□ 0.31
CD58P19256 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 MIR770-201ENST00000390219 98 ntBASIC16.98■□□□□ 0.31
CD58P19256 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.98■□□□□ 0.31
CD58P19256 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.98■□□□□ 0.31
CD58P19256 AL512638.1-201ENST00000457493 794 ntBASIC16.98■□□□□ 0.31
CD58P19256 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.98■□□□□ 0.31
CD58P19256 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.98■□□□□ 0.31
CD58P19256 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.98■□□□□ 0.31
CD58P19256 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.98■□□□□ 0.31
CD58P19256 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD58P19256 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CD58P19256 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD58P19256 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.97■□□□□ 0.31
CD58P19256 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CD58P19256 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.97■□□□□ 0.31
CD58P19256 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.97■□□□□ 0.31
CD58P19256 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 AC044860.1-202ENST00000559481 777 ntBASIC16.97■□□□□ 0.31
CD58P19256 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 AC097359.3-201ENST00000603982 1210 ntBASIC16.97■□□□□ 0.31
CD58P19256 AL109936.8-201ENST00000641772 604 ntBASIC16.97■□□□□ 0.31
CD58P19256 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CD58P19256 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CD58P19256 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.97■□□□□ 0.31
CD58P19256 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.97■□□□□ 0.31
CD58P19256 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms