Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.31■□□□□ 0.04
SP9P0CG40 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.31■□□□□ 0.04
SP9P0CG40 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SP9P0CG40 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.31■□□□□ 0.04
SP9P0CG40 AC132192.2-201ENST00000596206 1147 ntBASIC15.31■□□□□ 0.04
SP9P0CG40 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.31■□□□□ 0.04
SP9P0CG40 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.31■□□□□ 0.04
SP9P0CG40 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SP9P0CG40 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SP9P0CG40 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.31■□□□□ 0.04
SP9P0CG40 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.31■□□□□ 0.04
SP9P0CG40 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 AC004899.1-201ENST00000424687 1714 ntBASIC15.31■□□□□ 0.04
SP9P0CG40 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SP9P0CG40 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.31■□□□□ 0.04
SP9P0CG40 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SP9P0CG40 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SP9P0CG40 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SP9P0CG40 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SP9P0CG40 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SP9P0CG40 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SP9P0CG40 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SP9P0CG40 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.3■□□□□ 0.04
SP9P0CG40 POM121L8P-201ENST00000417732 1281 ntBASIC15.3■□□□□ 0.04
SP9P0CG40 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SP9P0CG40 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.3■□□□□ 0.04
SP9P0CG40 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.3■□□□□ 0.04
SP9P0CG40 POM121L9P-203ENST00000441984 1285 ntBASIC15.3■□□□□ 0.04
SP9P0CG40 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.3■□□□□ 0.04
SP9P0CG40 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.3■□□□□ 0.04
SP9P0CG40 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SP9P0CG40 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 AC092171.5-201ENST00000608012 942 ntBASIC15.3■□□□□ 0.04
SP9P0CG40 MIR6756-201ENST00000616240 63 ntBASIC15.3■□□□□ 0.04
SP9P0CG40 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.3■□□□□ 0.04
SP9P0CG40 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.3■□□□□ 0.04
SP9P0CG40 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP9P0CG40 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SP9P0CG40 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SP9P0CG40 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 AC078991.1-201ENST00000437297 610 ntBASIC15.29■□□□□ 0.04
SP9P0CG40 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SP9P0CG40 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.29■□□□□ 0.04
SP9P0CG40 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SP9P0CG40 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SP9P0CG40 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.29■□□□□ 0.04
SP9P0CG40 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.29■□□□□ 0.04
SP9P0CG40 AC068587.8-201ENST00000641239 219 ntBASIC15.29■□□□□ 0.04
SP9P0CG40 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.29■□□□□ 0.04
SP9P0CG40 AC141586.5-201ENST00000624546 2050 ntBASIC15.29■□□□□ 0.04
SP9P0CG40 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SP9P0CG40 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SP9P0CG40 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
SP9P0CG40 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP9P0CG40 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SP9P0CG40 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
SP9P0CG40 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP9P0CG40 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms