Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
HOXC6P09630 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXC6P09630 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.69■□□□□ 0.42
HOXC6P09630 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HOXC6P09630 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.69■□□□□ 0.42
HOXC6P09630 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.69■□□□□ 0.42
HOXC6P09630 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HOXC6P09630 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HOXC6P09630 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.69■□□□□ 0.42
HOXC6P09630 AC005695.3-201ENST00000614522 232 ntBASIC17.69■□□□□ 0.42
HOXC6P09630 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 AC244452.3-201ENST00000636814 210 ntBASIC17.69■□□□□ 0.42
HOXC6P09630 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 AC084018.2-201ENST00000613093 2607 ntBASIC17.69■□□□□ 0.42
HOXC6P09630 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXC6P09630 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HOXC6P09630 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 KRT8P35-201ENST00000483942 1338 ntBASIC17.69■□□□□ 0.42
HOXC6P09630 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXC6P09630 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC6P09630 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HOXC6P09630 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 ELK2AP-201ENST00000392510 1007 ntBASIC17.68■□□□□ 0.42
HOXC6P09630 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 AKR7A2P1-201ENST00000460134 915 ntBASIC17.68■□□□□ 0.42
HOXC6P09630 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXC6P09630 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.68■□□□□ 0.42
HOXC6P09630 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.68■□□□□ 0.42
HOXC6P09630 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HOXC6P09630 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXC6P09630 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HOXC6P09630 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC6P09630 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXC6P09630 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HOXC6P09630 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
HOXC6P09630 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HOXC6P09630 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOXC6P09630 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC6P09630 AC011477.6-201ENST00000604980 1927 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms