Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.63□□□□□ -0.23
ROS1P08922 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ROS1P08922 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.63□□□□□ -0.23
ROS1P08922 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ROS1P08922 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.63□□□□□ -0.23
ROS1P08922 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.63□□□□□ -0.23
ROS1P08922 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.63□□□□□ -0.23
ROS1P08922 AC022210.1-201ENST00000449856 793 ntBASIC13.63□□□□□ -0.23
ROS1P08922 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 SLC25A47P1-201ENST00000531577 414 ntBASIC13.63□□□□□ -0.23
ROS1P08922 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.63□□□□□ -0.23
ROS1P08922 CU634019.7-201ENST00000624153 1185 ntBASIC13.63□□□□□ -0.23
ROS1P08922 FP236241.2-201ENST00000624906 1185 ntBASIC13.63□□□□□ -0.23
ROS1P08922 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ROS1P08922 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ROS1P08922 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
ROS1P08922 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 POU5F1P6-201ENST00000466990 990 ntBASIC13.62□□□□□ -0.23
ROS1P08922 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.62□□□□□ -0.23
ROS1P08922 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.62□□□□□ -0.23
ROS1P08922 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ROS1P08922 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.62□□□□□ -0.23
ROS1P08922 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 AC136604.1-201ENST00000418535 575 ntBASIC13.62□□□□□ -0.23
ROS1P08922 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.62□□□□□ -0.23
ROS1P08922 AC104989.1-201ENST00000519711 778 ntBASIC13.62□□□□□ -0.23
ROS1P08922 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.62□□□□□ -0.23
ROS1P08922 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.62□□□□□ -0.23
ROS1P08922 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.62□□□□□ -0.23
ROS1P08922 AC134407.2-201ENST00000625089 1978 ntBASIC13.62□□□□□ -0.23
ROS1P08922 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ROS1P08922 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ROS1P08922 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms