Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 SPDYE14P-201ENST00000442619 822 ntBASIC14.58□□□□□ -0.08
THBS1P07996 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.58□□□□□ -0.08
THBS1P07996 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
THBS1P07996 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 C18orf15-201ENST00000623680 2534 ntBASIC14.57□□□□□ -0.08
THBS1P07996 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
THBS1P07996 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 AC023141.5-201ENST00000458585 616 ntBASIC14.57□□□□□ -0.08
THBS1P07996 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 AC026150.2-201ENST00000564693 1156 ntBASIC14.57□□□□□ -0.08
THBS1P07996 AL133215.2-201ENST00000609242 977 ntBASIC14.57□□□□□ -0.08
THBS1P07996 AC003101.2-201ENST00000612557 442 ntBASIC14.57□□□□□ -0.08
THBS1P07996 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.57□□□□□ -0.08
THBS1P07996 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
THBS1P07996 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.57□□□□□ -0.08
THBS1P07996 AC126365.1-201ENST00000578585 1514 ntBASIC14.56□□□□□ -0.08
THBS1P07996 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 AL607033.1-201ENST00000623900 1599 ntBASIC14.56□□□□□ -0.08
THBS1P07996 TSPY26P-202ENST00000565928 3884 ntBASIC14.56□□□□□ -0.08
THBS1P07996 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
THBS1P07996 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.56□□□□□ -0.08
THBS1P07996 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms