Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
COL5A2P05997 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
COL5A2P05997 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.33■□□□□ 0.85
COL5A2P05997 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COL5A2P05997 AL596276.2-201ENST00000447525 331 ntBASIC20.33■□□□□ 0.85
COL5A2P05997 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
COL5A2P05997 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.33■□□□□ 0.85
COL5A2P05997 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.33■□□□□ 0.85
COL5A2P05997 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.33■□□□□ 0.85
COL5A2P05997 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.33■□□□□ 0.85
COL5A2P05997 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL5A2P05997 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.33■□□□□ 0.84
COL5A2P05997 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.33■□□□□ 0.84
COL5A2P05997 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL5A2P05997 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.33■□□□□ 0.84
COL5A2P05997 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL5A2P05997 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.33■□□□□ 0.84
COL5A2P05997 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL5A2P05997 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COL5A2P05997 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COL5A2P05997 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.32■□□□□ 0.84
COL5A2P05997 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.32■□□□□ 0.84
COL5A2P05997 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.32■□□□□ 0.84
COL5A2P05997 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC20.32■□□□□ 0.84
COL5A2P05997 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.32■□□□□ 0.84
COL5A2P05997 AL645728.2-202ENST00000641679 227 ntBASIC20.32■□□□□ 0.84
COL5A2P05997 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COL5A2P05997 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COL5A2P05997 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
COL5A2P05997 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.32■□□□□ 0.84
COL5A2P05997 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL5A2P05997 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 PDIA3P2-201ENST00000428073 158 ntBASIC20.31■□□□□ 0.84
COL5A2P05997 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 CEP164P1-201ENST00000455142 418 ntBASIC20.31■□□□□ 0.84
COL5A2P05997 AC012618.1-201ENST00000461223 412 ntBASIC20.31■□□□□ 0.84
COL5A2P05997 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 SAMD11P1-201ENST00000571429 661 ntBASIC20.31■□□□□ 0.84
COL5A2P05997 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.31■□□□□ 0.84
COL5A2P05997 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.31■□□□□ 0.84
COL5A2P05997 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 AL805961.1-203ENST00000641078 1258 ntBASIC20.31■□□□□ 0.84
COL5A2P05997 AC068587.8-201ENST00000641239 219 ntBASIC20.31■□□□□ 0.84
COL5A2P05997 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.31■□□□□ 0.84
COL5A2P05997 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.31■□□□□ 0.84
COL5A2P05997 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.31■□□□□ 0.84
COL5A2P05997 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.31■□□□□ 0.84
COL5A2P05997 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.31■□□□□ 0.84
COL5A2P05997 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL5A2P05997 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 AC022616.1-201ENST00000518688 554 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC20.3■□□□□ 0.84
COL5A2P05997 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms