Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AL009183.1-201ENST00000603760 355 ntBASIC12.09□□□□□ -0.47
TCRAP04437 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TCRAP04437 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 AC018892.3-201ENST00000623986 2499 ntBASIC12.09□□□□□ -0.47
TCRAP04437 AC023024.2-201ENST00000623561 1993 ntBASIC12.09□□□□□ -0.47
TCRAP04437 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRAP04437 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRAP04437 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRAP04437 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
TCRAP04437 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.08□□□□□ -0.47
TCRAP04437 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
TCRAP04437 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TCRAP04437 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TCRAP04437 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.08□□□□□ -0.48
TCRAP04437 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.08□□□□□ -0.48
TCRAP04437 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 AF238378.1-201ENST00000526806 358 ntBASIC12.08□□□□□ -0.48
TCRAP04437 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.08□□□□□ -0.48
TCRAP04437 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 CLEC4GP1-201ENST00000596555 870 ntBASIC12.08□□□□□ -0.48
TCRAP04437 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TCRAP04437 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRAP04437 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
TCRAP04437 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRAP04437 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRAP04437 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TCRAP04437 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms