Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MT-CO1P00395 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MT-CO1P00395 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 AC114501.2-201ENST00000439631 535 ntBASIC16.24■□□□□ 0.19
MT-CO1P00395 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.24■□□□□ 0.19
MT-CO1P00395 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.24■□□□□ 0.19
MT-CO1P00395 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.24■□□□□ 0.19
MT-CO1P00395 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MT-CO1P00395 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MT-CO1P00395 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 AC068418.2-201ENST00000577309 3703 ntBASIC16.23■□□□□ 0.19
MT-CO1P00395 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.23■□□□□ 0.19
MT-CO1P00395 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-CO1P00395 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-CO1P00395 AL589987.1-201ENST00000453380 819 ntBASIC16.23■□□□□ 0.19
MT-CO1P00395 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-CO1P00395 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MT-CO1P00395 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.23■□□□□ 0.19
MT-CO1P00395 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.23■□□□□ 0.19
MT-CO1P00395 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-CO1P00395 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.23■□□□□ 0.19
MT-CO1P00395 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.23■□□□□ 0.19
MT-CO1P00395 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-CO1P00395 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MT-CO1P00395 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-CO1P00395 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-CO1P00395 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.22■□□□□ 0.19
MT-CO1P00395 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.22■□□□□ 0.19
MT-CO1P00395 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-CO1P00395 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MT-CO1P00395 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MT-CO1P00395 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-CO1P00395 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms