Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
NKX2-2O95096 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-2O95096 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX2-2O95096 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-2O95096 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 AC112693.3-201ENST00000624819 1983 ntBASIC14.56□□□□□ -0.08
NKX2-2O95096 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.56□□□□□ -0.08
NKX2-2O95096 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX2-2O95096 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
NKX2-2O95096 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
NKX2-2O95096 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX2-2O95096 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.56□□□□□ -0.08
NKX2-2O95096 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.56□□□□□ -0.08
NKX2-2O95096 AC015922.1-201ENST00000421102 1152 ntBASIC14.56□□□□□ -0.08
NKX2-2O95096 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 AC055876.3-201ENST00000431496 288 ntBASIC14.56□□□□□ -0.08
NKX2-2O95096 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.56□□□□□ -0.08
NKX2-2O95096 IGHV3-42-201ENST00000520410 361 ntBASIC14.56□□□□□ -0.08
NKX2-2O95096 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.56□□□□□ -0.08
NKX2-2O95096 AC138649.4-201ENST00000612222 287 ntBASIC14.56□□□□□ -0.08
NKX2-2O95096 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX2-2O95096 AL109936.8-201ENST00000641772 604 ntBASIC14.56□□□□□ -0.08
NKX2-2O95096 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-2O95096 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX2-2O95096 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NKX2-2O95096 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX2-2O95096 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-2O95096 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-2O95096 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NKX2-2O95096 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NKX2-2O95096 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-2O95096 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NKX2-2O95096 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-2O95096 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-2O95096 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX2-2O95096 TOMM22P5-201ENST00000416399 439 ntBASIC14.55□□□□□ -0.08
NKX2-2O95096 KRT18P64-201ENST00000434946 1219 ntBASIC14.55□□□□□ -0.08
NKX2-2O95096 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX2-2O95096 AC009477.1-201ENST00000452936 217 ntBASIC14.55□□□□□ -0.08
NKX2-2O95096 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-2O95096 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX2-2O95096 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX2-2O95096 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX2-2O95096 AC044860.1-202ENST00000559481 777 ntBASIC14.55□□□□□ -0.08
NKX2-2O95096 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX2-2O95096 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms