Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PFDN1O60925 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN1O60925 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.1□□□□□ -0.15
PFDN1O60925 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 SOX15-203ENST00000570788 1093 ntBASIC14.1□□□□□ -0.15
PFDN1O60925 AC133552.2-202ENST00000575694 574 ntBASIC14.1□□□□□ -0.15
PFDN1O60925 PGM5P2-202ENST00000637225 1043 ntBASIC14.1□□□□□ -0.15
PFDN1O60925 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
PFDN1O60925 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PFDN1O60925 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN1O60925 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PFDN1O60925 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 AL021920.2-201ENST00000624828 1351 ntBASIC14.09□□□□□ -0.15
PFDN1O60925 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.09□□□□□ -0.15
PFDN1O60925 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PFDN1O60925 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PFDN1O60925 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PFDN1O60925 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.09□□□□□ -0.15
PFDN1O60925 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.09□□□□□ -0.15
PFDN1O60925 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.09□□□□□ -0.15
PFDN1O60925 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.09□□□□□ -0.15
PFDN1O60925 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.09□□□□□ -0.15
PFDN1O60925 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.09□□□□□ -0.15
PFDN1O60925 AC124016.1-201ENST00000609552 612 ntBASIC14.09□□□□□ -0.15
PFDN1O60925 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.09□□□□□ -0.15
PFDN1O60925 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 MAPK10-262ENST00000641051 5738 ntBASIC14.09□□□□□ -0.15
PFDN1O60925 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PFDN1O60925 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PFDN1O60925 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.09□□□□□ -0.15
PFDN1O60925 MTHFR-210ENST00000641407 2387 ntBASIC14.09□□□□□ -0.15
PFDN1O60925 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PFDN1O60925 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PFDN1O60925 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.09□□□□□ -0.15
PFDN1O60925 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PFDN1O60925 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
PFDN1O60925 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PFDN1O60925 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PFDN1O60925 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.08□□□□□ -0.15
PFDN1O60925 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PFDN1O60925 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PFDN1O60925 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.08□□□□□ -0.16
PFDN1O60925 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms