Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CACNA1FO60840 AC105917.1-201ENST00000506637 2539 ntBASIC19.53■□□□□ 0.72
CACNA1FO60840 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNA1FO60840 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CACNA1FO60840 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CACNA1FO60840 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNA1FO60840 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNA1FO60840 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
CACNA1FO60840 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1FO60840 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CACNA1FO60840 AC023024.2-201ENST00000623561 1993 ntBASIC19.53■□□□□ 0.72
CACNA1FO60840 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 AC134312.5-201ENST00000568031 1313 ntBASIC19.52■□□□□ 0.72
CACNA1FO60840 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CACNA1FO60840 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 KLF2P2-201ENST00000416807 1039 ntBASIC19.52■□□□□ 0.72
CACNA1FO60840 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1FO60840 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.52■□□□□ 0.72
CACNA1FO60840 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CACNA1FO60840 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.52■□□□□ 0.72
CACNA1FO60840 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1FO60840 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 AC013268.4-201ENST00000637413 2228 ntBASIC19.52■□□□□ 0.72
CACNA1FO60840 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1FO60840 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CACNA1FO60840 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1FO60840 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1FO60840 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1FO60840 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNA1FO60840 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
CACNA1FO60840 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1FO60840 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1FO60840 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1FO60840 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1FO60840 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.52■□□□□ 0.71
CACNA1FO60840 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
CACNA1FO60840 KRT17P8-201ENST00000540749 863 ntBASIC19.52■□□□□ 0.71
CACNA1FO60840 RHOXF1P1-202ENST00000635473 501 ntBASIC19.52■□□□□ 0.71
CACNA1FO60840 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1FO60840 AP000845.1-201ENST00000581677 2131 ntBASIC19.51■□□□□ 0.71
CACNA1FO60840 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CACNA1FO60840 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNA1FO60840 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CACNA1FO60840 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CACNA1FO60840 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 CNN2P10-201ENST00000443067 918 ntBASIC19.51■□□□□ 0.71
CACNA1FO60840 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1FO60840 AC106820.3-201ENST00000561653 397 ntBASIC19.51■□□□□ 0.71
CACNA1FO60840 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CACNA1FO60840 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNA1FO60840 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1FO60840 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1FO60840 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CACNA1FO60840 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms