Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 AP3S2-216ENST00000617003 1561 ntBASIC14.88□□□□□ -0.03
HCN1O60741 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 AC069224.1-201ENST00000566372 1715 ntBASIC14.88□□□□□ -0.03
HCN1O60741 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.88□□□□□ -0.03
HCN1O60741 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HCN1O60741 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.88□□□□□ -0.03
HCN1O60741 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HCN1O60741 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.88□□□□□ -0.03
HCN1O60741 AC073439.1-201ENST00000624121 1774 ntBASIC14.88□□□□□ -0.03
HCN1O60741 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.88□□□□□ -0.03
HCN1O60741 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HCN1O60741 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.87□□□□□ -0.03
HCN1O60741 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.87□□□□□ -0.03
HCN1O60741 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.87□□□□□ -0.03
HCN1O60741 AC069120.2-201ENST00000524091 540 ntBASIC14.87□□□□□ -0.03
HCN1O60741 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.87□□□□□ -0.03
HCN1O60741 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
HCN1O60741 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HCN1O60741 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HCN1O60741 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HCN1O60741 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.86□□□□□ -0.03
HCN1O60741 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.86□□□□□ -0.03
HCN1O60741 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HCN1O60741 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HCN1O60741 FAM220BP-201ENST00000377689 816 ntBASIC14.86□□□□□ -0.03
HCN1O60741 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HCN1O60741 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 MIR4453-201ENST00000584019 89 ntBASIC14.86□□□□□ -0.03
HCN1O60741 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.86□□□□□ -0.03
HCN1O60741 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 AL390955.2-201ENST00000603032 514 ntBASIC14.86□□□□□ -0.03
HCN1O60741 LINC02084-201ENST00000606069 1096 ntBASIC14.86□□□□□ -0.03
HCN1O60741 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 AJ011932.1-201ENST00000621707 465 ntBASIC14.86□□□□□ -0.03
HCN1O60741 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.86□□□□□ -0.03
HCN1O60741 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms