Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCA5O60264 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCA5O60264 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.49■□□□□ 0.71
SMARCA5O60264 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SMARCA5O60264 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SMARCA5O60264 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.49■□□□□ 0.71
SMARCA5O60264 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.49■□□□□ 0.71
SMARCA5O60264 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SMARCA5O60264 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.49■□□□□ 0.71
SMARCA5O60264 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.49■□□□□ 0.71
SMARCA5O60264 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.49■□□□□ 0.71
SMARCA5O60264 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCA5O60264 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCA5O60264 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 AC112693.3-201ENST00000624819 1983 ntBASIC19.48■□□□□ 0.71
SMARCA5O60264 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.48■□□□□ 0.71
SMARCA5O60264 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 RN7SL618P-201ENST00000477850 296 ntBASIC19.48■□□□□ 0.71
SMARCA5O60264 AC009407.1-201ENST00000568958 598 ntBASIC19.48■□□□□ 0.71
SMARCA5O60264 AC027796.2-201ENST00000575326 344 ntBASIC19.48■□□□□ 0.71
SMARCA5O60264 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SMARCA5O60264 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 AC087499.5-201ENST00000452760 1342 ntBASIC19.48■□□□□ 0.71
SMARCA5O60264 AC104640.1-201ENST00000562617 2109 ntBASIC19.48■□□□□ 0.71
SMARCA5O60264 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMARCA5O60264 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCA5O60264 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SMARCA5O60264 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCA5O60264 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMARCA5O60264 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCA5O60264 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.47■□□□□ 0.71
SMARCA5O60264 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.47■□□□□ 0.71
SMARCA5O60264 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.47■□□□□ 0.71
SMARCA5O60264 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms