Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC009090.5-201ENST00000624886 2285 ntBASIC14.1□□□□□ -0.15
TRAF3IP2O43734 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 AC010336.2-201ENST00000564226 506 ntBASIC14.09□□□□□ -0.15
TRAF3IP2O43734 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAF3IP2O43734 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 AC127383.1-201ENST00000444697 1800 ntBASIC14.08□□□□□ -0.15
TRAF3IP2O43734 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 MIR600HG-201ENST00000449175 5984 ntBASIC14.08□□□□□ -0.15
TRAF3IP2O43734 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAF3IP2O43734 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 AC090616.6-203ENST00000579186 1945 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 MST1L-201ENST00000442552 2185 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 MIR943-201ENST00000401286 94 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 AC074338.1-201ENST00000416825 156 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 RN7SL618P-201ENST00000477850 296 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 AC097493.3-201ENST00000509725 367 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 AC027369.6-201ENST00000525520 931 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 SSR4P1-203ENST00000599569 2260 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms