Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC24.75■■□□□ 1.55
CHD1O14646 AC004837.1-201ENST00000446267 564 ntBASIC24.75■■□□□ 1.55
CHD1O14646 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC24.75■■□□□ 1.55
CHD1O14646 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC24.75■■□□□ 1.55
CHD1O14646 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.75■■□□□ 1.55
CHD1O14646 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CHD1O14646 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC24.75■■□□□ 1.55
CHD1O14646 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC24.75■■□□□ 1.55
CHD1O14646 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC24.75■■□□□ 1.55
CHD1O14646 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC24.75■■□□□ 1.55
CHD1O14646 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
CHD1O14646 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CHD1O14646 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CHD1O14646 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC24.74■■□□□ 1.55
CHD1O14646 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC24.74■■□□□ 1.55
CHD1O14646 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC24.74■■□□□ 1.55
CHD1O14646 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 HPN-206ENST00000597419 1212 ntTSL 5 BASIC24.74■■□□□ 1.55
CHD1O14646 AC138466.5-201ENST00000624002 808 ntBASIC24.74■■□□□ 1.55
CHD1O14646 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHD1O14646 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC24.74■■□□□ 1.55
CHD1O14646 AC141586.5-201ENST00000624546 2050 ntBASIC24.73■■□□□ 1.55
CHD1O14646 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC24.73■■□□□ 1.55
CHD1O14646 AC008723.1-201ENST00000506922 207 ntBASIC24.73■■□□□ 1.55
CHD1O14646 DUX4L46-201ENST00000566845 751 ntBASIC24.73■■□□□ 1.55
CHD1O14646 RPS15-202ENST00000585665 467 ntTSL 3 BASIC24.73■■□□□ 1.55
CHD1O14646 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
CHD1O14646 AC073592.2-201ENST00000623062 780 ntBASIC24.73■■□□□ 1.55
CHD1O14646 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CHD1O14646 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
CHD1O14646 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 AC105020.1-201ENST00000435356 2205 ntBASIC24.73■■□□□ 1.55
CHD1O14646 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
CHD1O14646 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHD1O14646 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC24.72■■□□□ 1.55
CHD1O14646 AK6-201ENST00000380818 1183 ntTSL 2 BASIC24.72■■□□□ 1.55
CHD1O14646 HIST2H2BA-201ENST00000412169 381 ntBASIC24.72■■□□□ 1.55
CHD1O14646 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC24.72■■□□□ 1.55
CHD1O14646 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
CHD1O14646 FKBP4P6-201ENST00000457486 1332 ntBASIC24.72■■□□□ 1.55
CHD1O14646 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CHD1O14646 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CHD1O14646 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CHD1O14646 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHD1O14646 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC24.72■■□□□ 1.55
CHD1O14646 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC24.72■■□□□ 1.55
CHD1O14646 FAM58BP-201ENST00000439056 645 ntBASIC24.72■■□□□ 1.55
CHD1O14646 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC24.72■■□□□ 1.55
CHD1O14646 LINC00634-202ENST00000505157 222 ntBASIC24.72■■□□□ 1.55
CHD1O14646 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms