Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN5O00501 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN5O00501 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN5O00501 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN5O00501 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 AC132872.4-202ENST00000622924 2756 ntBASIC16.62■□□□□ 0.25
CLDN5O00501 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 AL121723.1-201ENST00000445194 1519 ntBASIC16.62■□□□□ 0.25
CLDN5O00501 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN5O00501 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN5O00501 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 AC005225.4-201ENST00000557330 545 ntBASIC16.62■□□□□ 0.25
CLDN5O00501 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 AC009090.5-201ENST00000624886 2285 ntBASIC16.62■□□□□ 0.25
CLDN5O00501 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.62■□□□□ 0.25
CLDN5O00501 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN5O00501 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN5O00501 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN5O00501 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN5O00501 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN5O00501 AC138969.3-201ENST00000546612 1459 ntBASIC16.61■□□□□ 0.25
CLDN5O00501 AC138932.2-201ENST00000548268 1459 ntBASIC16.61■□□□□ 0.25
CLDN5O00501 AC126755.4-201ENST00000549796 1459 ntBASIC16.61■□□□□ 0.25
CLDN5O00501 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN5O00501 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN5O00501 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN5O00501 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN5O00501 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN5O00501 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN5O00501 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 AC036164.1-201ENST00000570544 333 ntBASIC16.61■□□□□ 0.25
CLDN5O00501 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN5O00501 AC012645.4-201ENST00000610691 1061 ntBASIC16.61■□□□□ 0.25
CLDN5O00501 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN5O00501 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLDN5O00501 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
CLDN5O00501 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 AC092850.2-201ENST00000623821 2697 ntBASIC16.61■□□□□ 0.25
CLDN5O00501 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN5O00501 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN5O00501 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms