Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMX2-CTNND1H3BSU7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL512384.1-201ENST00000406683 331 ntBASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 HLA-J-202ENST00000469281 1241 ntBASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC061975.2-201ENST00000581722 295 ntBASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.58■□□□□ 0.08
TMX2-CTNND1H3BSU7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL391256.1-201ENST00000443260 1855 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC138035.3-201ENST00000622706 2791 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 DGCR5-201ENST00000399539 862 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC044860.1-202ENST00000559481 777 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC106886.1-201ENST00000568660 600 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC099568.2-201ENST00000609194 695 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 SLC7A15P-201ENST00000424028 1363 ntBASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMX2-CTNND1H3BSU7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms