Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM3A6NNA2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRRM3A6NNA2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.46■□□□□ 0.23
SRRM3A6NNA2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SRRM3A6NNA2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SRRM3A6NNA2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.46■□□□□ 0.22
SRRM3A6NNA2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
SRRM3A6NNA2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SRRM3A6NNA2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SRRM3A6NNA2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
SRRM3A6NNA2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SRRM3A6NNA2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AL592424.1-201ENST00000563624 1536 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AL020989.1-201ENST00000422979 469 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 ADH5P3-201ENST00000433842 1137 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 U91328.1-201ENST00000437528 223 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AC125807.1-201ENST00000483097 614 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 OR7E47P-204ENST00000575924 449 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 AL805961.1-202ENST00000641562 540 ntBASIC16.45■□□□□ 0.22
SRRM3A6NNA2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM3A6NNA2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 PIN1P1-201ENST00000412108 996 ntBASIC16.44■□□□□ 0.22
SRRM3A6NNA2 TREML5P-201ENST00000421694 576 ntBASIC16.44■□□□□ 0.22
SRRM3A6NNA2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 MIR4492-201ENST00000581627 80 ntBASIC16.44■□□□□ 0.22
SRRM3A6NNA2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM3A6NNA2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms