Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AP003400.6-201ENST00000624698 740 ntBASIC16.83■□□□□ 0.28
RCCD1A6NED2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.83■□□□□ 0.28
RCCD1A6NED2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.83■□□□□ 0.28
RCCD1A6NED2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RCCD1A6NED2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RCCD1A6NED2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RCCD1A6NED2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 AL607033.1-201ENST00000623900 1599 ntBASIC16.82■□□□□ 0.28
RCCD1A6NED2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.82■□□□□ 0.28
RCCD1A6NED2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 AC112191.1-201ENST00000523689 701 ntBASIC16.82■□□□□ 0.28
RCCD1A6NED2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 CICP14-201ENST00000629111 2732 ntBASIC16.82■□□□□ 0.28
RCCD1A6NED2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
RCCD1A6NED2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCCD1A6NED2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 MIR346-201ENST00000362234 95 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TFAMP1-201ENST00000412727 736 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 ADH5P3-201ENST00000433842 1137 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 RPL13AP23-201ENST00000480739 586 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 AL662844.1-201ENST00000546340 181 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 AC243562.1-201ENST00000560672 389 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 AC140479.7-201ENST00000636301 2332 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 CICP11-201ENST00000434745 2827 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.81■□□□□ 0.28
RCCD1A6NED2 MROH4P-201ENST00000431302 1578 ntBASIC16.81■□□□□ 0.28
RCCD1A6NED2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCCD1A6NED2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms