Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AL662844.4-201ENST00000606367 2838 ntBASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 NKILA-202ENST00000614771 2598 ntBASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CYP2AB1P-202ENST00000454440 1456 ntBASIC16■□□□□ 0.15
TBC1D3BA6NDS4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 AC005229.1-201ENST00000392885 409 ntBASIC16■□□□□ 0.15
TBC1D3BA6NDS4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 AL355864.2-201ENST00000447420 863 ntBASIC16■□□□□ 0.15
TBC1D3BA6NDS4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 AC011477.6-201ENST00000604980 1927 ntBASIC16■□□□□ 0.15
TBC1D3BA6NDS4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TBC1D3BA6NDS4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 PCDHA14-201ENST00000506751 2298 ntBASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 BNIP3P42-201ENST00000454982 569 ntBASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AP001889.1-201ENST00000525414 633 ntBASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 BNIP3P29-201ENST00000598302 571 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms