Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRBV6-7A0A0A0MS04 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 KRT18P2-201ENST00000447938 1258 ntBASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC074386.1-202ENST00000463561 864 ntBASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 AP002472.1-201ENST00000577490 586 ntBASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 SPTSSB-204ENST00000617024 1292 ntBASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 HLA-A-201ENST00000376802 1334 ntBASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC112191.1-201ENST00000523689 701 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC105233.2-201ENST00000523697 349 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AF228730.5-201ENST00000530288 346 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 BNIP3P1-202ENST00000550043 1585 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 PDPK2P-202ENST00000562415 1191 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC104109.2-201ENST00000602919 1418 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC148477.4-201ENST00000613430 1793 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CICP14-201ENST00000629111 2732 ntBASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-7A0A0A0MS04 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms