Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 C18orf15-201ENST00000623680 2534 ntBASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP46A1Q9Y6A2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 SPDYE17-201ENST00000412399 783 ntBASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 AC136604.1-201ENST00000418535 575 ntBASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 RN7SL828P-201ENST00000607615 303 ntBASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CYP46A1Q9Y6A2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 AL607033.1-201ENST00000623900 1599 ntBASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 AC006058.4-201ENST00000624016 1670 ntBASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 FO393414.2-201ENST00000405153 598 ntBASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 AC092865.5-201ENST00000545435 363 ntBASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 AL035456.1-201ENST00000456064 1369 ntBASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP46A1Q9Y6A2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CYP46A1Q9Y6A2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.76■□□□□ 0.59
CYP46A1Q9Y6A2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms