Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 PRAL-201ENST00000624952 3286 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 AL450472.2-201ENST00000603663 1156 ntBASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB1Q9Y5F3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 DGCR5-201ENST00000399539 862 ntBASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 AL353779.1-201ENST00000434793 351 ntBASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 GIMAP3P-201ENST00000495150 836 ntBASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 RN7SL828P-201ENST00000607615 303 ntBASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 IGHV3-72-202ENST00000621503 303 ntBASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms