Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.03■□□□□ -0
AP4S1Q9Y587 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.03■□□□□ -0
AP4S1Q9Y587 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
AP4S1Q9Y587 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.02■□□□□ -0
AP4S1Q9Y587 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
AP4S1Q9Y587 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.02■□□□□ -0
AP4S1Q9Y587 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.02■□□□□ -0
AP4S1Q9Y587 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
AP4S1Q9Y587 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
AP4S1Q9Y587 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
AP4S1Q9Y587 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.02■□□□□ -0
AP4S1Q9Y587 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
AP4S1Q9Y587 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.02■□□□□ -0
AP4S1Q9Y587 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.02■□□□□ -0
AP4S1Q9Y587 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
AP4S1Q9Y587 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4S1Q9Y587 AC099336.1-202ENST00000602961 463 ntBASIC15.02■□□□□ -0
AP4S1Q9Y587 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.02■□□□□ -0
AP4S1Q9Y587 GGTLC5P-201ENST00000617623 998 ntBASIC15.02■□□□□ -0
AP4S1Q9Y587 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP4S1Q9Y587 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms