Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PRYP6-201ENST00000514804 343 ntBASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AC148477.4-201ENST00000613430 1793 ntBASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2D4Q9Y2X8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AL645939.2-201ENST00000427340 991 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 UPK3BP1-201ENST00000428678 509 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AF186996.4-201ENST00000467186 377 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 MIR4313-201ENST00000580760 101 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AC097376.2-205ENST00000610159 5334 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 FGD5P1-202ENST00000614866 2498 ntBASIC11.06□□□□□ -0.64
UBE2D4Q9Y2X8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms