Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 SPDYE17-201ENST00000412399 783 ntBASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 AL512356.2-201ENST00000546955 174 ntBASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 SNHG9-202ENST00000564014 471 ntBASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 AC079781.4-201ENST00000641908 219 ntBASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS9D1Q9Y2B5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 AC087481.3-201ENST00000602886 1894 ntBASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 AC007919.2-201ENST00000444110 511 ntBASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 AC004967.1-201ENST00000453589 447 ntBASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 TMF1P1-201ENST00000576058 373 ntBASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 MIR6080-201ENST00000617359 66 ntBASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS9D1Q9Y2B5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 KRT18P13-201ENST00000400056 1290 ntBASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms