Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 KRT18P34-201ENST00000488218 1270 ntBASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AC112191.1-201ENST00000523689 701 ntBASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AC040169.1-201ENST00000565382 521 ntBASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AC068137.2-201ENST00000605408 478 ntBASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 REXO1L8P-201ENST00000604378 1897 ntBASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HHLA3Q9XRX5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 AL513190.1-201ENST00000621254 727 ntBASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 AL390755.1-201ENST00000623716 2027 ntBASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HHLA3Q9XRX5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.65□□□□□ -0.55
HHLA3Q9XRX5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.65□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms