Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VAPAQ9P0L0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC007686.3-201ENST00000619017 3487 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 LINC00552-201ENST00000625151 2579 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC026748.1-201ENST00000624349 3251 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AL645939.2-201ENST00000427340 991 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 PHKG1P2-201ENST00000457537 863 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 RNA5SP410-201ENST00000516285 106 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC008267.7-201ENST00000624570 1194 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 AC092865.6-201ENST00000642101 219 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 KRT8P37-201ENST00000451609 1420 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 CYP4F24P-201ENST00000586049 1580 ntBASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.98□□□□□ -0.01
VAPAQ9P0L0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 AKAP8P1-201ENST00000434743 1349 ntBASIC14.97□□□□□ -0.01
VAPAQ9P0L0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 FAM220BP-201ENST00000377689 816 ntBASIC14.97□□□□□ -0.01
VAPAQ9P0L0 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.97□□□□□ -0.01
VAPAQ9P0L0 AL135744.1-201ENST00000565098 629 ntBASIC14.97□□□□□ -0.01
VAPAQ9P0L0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms