Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.85■□□□□ 0.29
CISHQ9NSE2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CISHQ9NSE2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.85■□□□□ 0.29
CISHQ9NSE2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CISHQ9NSE2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.85■□□□□ 0.29
CISHQ9NSE2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CISHQ9NSE2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.85■□□□□ 0.29
CISHQ9NSE2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.85■□□□□ 0.29
CISHQ9NSE2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CISHQ9NSE2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 AC090616.6-203ENST00000579186 1945 ntBASIC16.84■□□□□ 0.29
CISHQ9NSE2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 FAM8A3P-201ENST00000427218 844 ntBASIC16.84■□□□□ 0.29
CISHQ9NSE2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 UGT1A2P-201ENST00000454886 866 ntBASIC16.84■□□□□ 0.29
CISHQ9NSE2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 AC135586.1-201ENST00000539323 574 ntBASIC16.84■□□□□ 0.29
CISHQ9NSE2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CISHQ9NSE2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CISHQ9NSE2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CISHQ9NSE2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CISHQ9NSE2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CISHQ9NSE2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CISHQ9NSE2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CISHQ9NSE2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CISHQ9NSE2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AC015922.1-201ENST00000421102 1152 ntBASIC16.83■□□□□ 0.28
CISHQ9NSE2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.83■□□□□ 0.28
CISHQ9NSE2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 SPDYE18-201ENST00000510091 1050 ntBASIC16.83■□□□□ 0.28
CISHQ9NSE2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 HYMAI-201ENST00000635591 3347 ntBASIC16.83■□□□□ 0.28
CISHQ9NSE2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.83■□□□□ 0.28
CISHQ9NSE2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CISHQ9NSE2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CISHQ9NSE2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CISHQ9NSE2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CISHQ9NSE2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CISHQ9NSE2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms