Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SPDYE12P-201ENST00000618416 771 ntBASIC16.73■□□□□ 0.27
CD248Q9HCU0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 AC073592.8-201ENST00000624126 511 ntBASIC16.73■□□□□ 0.27
CD248Q9HCU0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CD248Q9HCU0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD248Q9HCU0 MTHFR-217ENST00000641820 1569 ntBASIC16.72■□□□□ 0.27
CD248Q9HCU0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 AL671710.1-201ENST00000610245 2349 ntBASIC16.72■□□□□ 0.27
CD248Q9HCU0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 NORAD-201ENST00000565493 5339 ntBASIC16.72■□□□□ 0.27
CD248Q9HCU0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CD248Q9HCU0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 AC010491.1-201ENST00000563101 2797 ntBASIC16.72■□□□□ 0.27
CD248Q9HCU0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD248Q9HCU0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 AC006277.1-201ENST00000624348 1610 ntBASIC16.71■□□□□ 0.27
CD248Q9HCU0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 SERBP1P5-201ENST00000510079 1181 ntBASIC16.71■□□□□ 0.27
CD248Q9HCU0 PRYP6-201ENST00000514804 343 ntBASIC16.71■□□□□ 0.27
CD248Q9HCU0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.71■□□□□ 0.27
CD248Q9HCU0 AC012645.4-201ENST00000610691 1061 ntBASIC16.71■□□□□ 0.27
CD248Q9HCU0 AL138828.2-201ENST00000615812 383 ntBASIC16.71■□□□□ 0.27
CD248Q9HCU0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms