Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A7P-201ENST00000382628 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A23P-201ENST00000400136 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A21P-201ENST00000510875 1396 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A15P-201ENST00000514465 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A6P-201ENST00000515148 1394 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A16P-201ENST00000526662 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A9P-201ENST00000527940 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A5P-201ENST00000528738 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A14P-201ENST00000530386 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 FAM90A13P-201ENST00000534703 1395 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 OR2K2-202ENST00000374428 1038 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC009779.1-201ENST00000551138 283 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AL645728.2-202ENST00000641679 227 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 AC090164.3-201ENST00000610780 2143 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 CHMP1AP1-201ENST00000445563 662 ntBASIC14.35□□□□□ -0.11
CHD8Q9HCK8 AC124947.2-201ENST00000547118 1133 ntBASIC14.35□□□□□ -0.11
CHD8Q9HCK8 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 MIR6125-201ENST00000618986 96 ntBASIC14.35□□□□□ -0.11
CHD8Q9HCK8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 AC018695.7-201ENST00000624587 2492 ntBASIC14.35□□□□□ -0.11
CHD8Q9HCK8 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD8Q9HCK8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD8Q9HCK8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CHD8Q9HCK8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms