Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 TREML5P-201ENST00000421694 576 ntBASIC13.91□□□□□ -0.18
CDH20Q9HBT6 SERBP1P3-201ENST00000459980 809 ntBASIC13.91□□□□□ -0.18
CDH20Q9HBT6 AC027369.6-201ENST00000525520 931 ntBASIC13.91□□□□□ -0.18
CDH20Q9HBT6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 AL079307.3-201ENST00000556114 283 ntBASIC13.91□□□□□ -0.18
CDH20Q9HBT6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 LINC02447-202ENST00000501888 2146 ntBASIC13.91□□□□□ -0.18
CDH20Q9HBT6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH20Q9HBT6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 CDC14C-201ENST00000428251 1719 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 AC069224.1-201ENST00000566372 1715 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 HLA-V-204ENST00000476601 1289 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 RFPL4AP1-201ENST00000530883 850 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 AL158211.3-201ENST00000607385 239 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 SPDYE12P-201ENST00000618416 771 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 BNIP3P1-202ENST00000550043 1585 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 MYO15B-237ENST00000642007 4893 ntBASIC13.9□□□□□ -0.18
CDH20Q9HBT6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH20Q9HBT6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.9□□□□□ -0.19
CDH20Q9HBT6 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.9□□□□□ -0.19
CDH20Q9HBT6 KRT8P37-201ENST00000451609 1420 ntBASIC13.9□□□□□ -0.19
CDH20Q9HBT6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms