Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP6V0A4Q9HBG4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP6V0A4Q9HBG4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP6V0A4Q9HBG4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP6V0A4Q9HBG4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP6V0A4Q9HBG4 AL513523.2-202ENST00000427283 2040 ntBASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 DGCR5-201ENST00000399539 862 ntBASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 AC074338.1-201ENST00000416825 156 ntBASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 AL359881.2-201ENST00000602973 570 ntBASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 LINC01115-203ENST00000606068 577 ntBASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP6V0A4Q9HBG4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 AC007950.2-201ENST00000615045 2347 ntBASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 TIMM17BP1-201ENST00000545713 516 ntBASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 NFIC-211ENST00000641145 8399 ntBASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP6V0A4Q9HBG4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 AC112504.1-201ENST00000623415 1841 ntBASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP6V0A4Q9HBG4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ATP6V0A4Q9HBG4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP6V0A4Q9HBG4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ATP6V0A4Q9HBG4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP6V0A4Q9HBG4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP6V0A4Q9HBG4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms