Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 AC027307.3-201ENST00000594262 1100 ntBASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 AL109936.8-201ENST00000641772 604 ntBASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 AC114501.2-201ENST00000439631 535 ntBASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 AC074044.1-201ENST00000609673 707 ntBASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP3Q9BWW4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 BNIP3P1-202ENST00000550043 1585 ntBASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 AC092364.2-201ENST00000596710 2692 ntBASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 EEF1DP4-201ENST00000446006 880 ntBASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 DOC2GP-202ENST00000514950 1163 ntBASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms