Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.42■□□□□ 0.06
PKP4Q99569 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PKP4Q99569 AC138649.4-201ENST00000612222 287 ntBASIC15.42■□□□□ 0.06
PKP4Q99569 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.42■□□□□ 0.06
PKP4Q99569 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PKP4Q99569 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PKP4Q99569 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PKP4Q99569 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.42■□□□□ 0.06
PKP4Q99569 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PKP4Q99569 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.42■□□□□ 0.06
PKP4Q99569 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.42■□□□□ 0.06
PKP4Q99569 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.42■□□□□ 0.06
PKP4Q99569 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.42■□□□□ 0.06
PKP4Q99569 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.42■□□□□ 0.06
PKP4Q99569 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PKP4Q99569 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.41■□□□□ 0.06
PKP4Q99569 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.41■□□□□ 0.06
PKP4Q99569 TARDBPP1-201ENST00000442013 1203 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 RN7SL618P-201ENST00000477850 296 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PKP4Q99569 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.41■□□□□ 0.06
PKP4Q99569 AC010336.2-201ENST00000564226 506 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.41■□□□□ 0.06
PKP4Q99569 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 AL390955.2-201ENST00000603032 514 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 AC087499.5-201ENST00000452760 1342 ntBASIC15.41■□□□□ 0.06
PKP4Q99569 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PKP4Q99569 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PKP4Q99569 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.41■□□□□ 0.06
PKP4Q99569 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.4■□□□□ 0.06
PKP4Q99569 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.4■□□□□ 0.06
PKP4Q99569 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.4■□□□□ 0.06
PKP4Q99569 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PKP4Q99569 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.4■□□□□ 0.06
PKP4Q99569 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
PKP4Q99569 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PKP4Q99569 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.4■□□□□ 0.06
PKP4Q99569 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms