Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
RAB40CQ96S21 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.9□□□□□ -0.35
RAB40CQ96S21 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.9□□□□□ -0.35
RAB40CQ96S21 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 HMGA1P7-201ENST00000406908 502 ntBASIC12.89□□□□□ -0.35
RAB40CQ96S21 AL645939.2-201ENST00000427340 991 ntBASIC12.89□□□□□ -0.35
RAB40CQ96S21 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 FGFR3P6-201ENST00000457012 610 ntBASIC12.89□□□□□ -0.35
RAB40CQ96S21 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 KRT18P34-201ENST00000488218 1270 ntBASIC12.89□□□□□ -0.35
RAB40CQ96S21 AC136632.2-201ENST00000512891 861 ntBASIC12.89□□□□□ -0.35
RAB40CQ96S21 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 AL645728.2-201ENST00000641974 660 ntBASIC12.89□□□□□ -0.35
RAB40CQ96S21 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
RAB40CQ96S21 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB40CQ96S21 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms