Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 SCARNA2-201ENST00000458748 420 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 IGHV3-65-201ENST00000523210 341 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AC109635.5-201ENST00000533593 962 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AC006504.5-208ENST00000588784 2401 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 BX640514.1-201ENST00000583223 1918 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AC139749.1-202ENST00000617529 3139 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 REXO1L1P-202ENST00000608646 1974 ntBASIC13.65□□□□□ -0.22
CMTM3Q96MX0 AL691432.1-201ENST00000596308 1422 ntBASIC13.65□□□□□ -0.22
CMTM3Q96MX0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 SART3-203ENST00000546611 1184 ntBASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CMTM3Q96MX0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CMTM3Q96MX0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.65□□□□□ -0.23
CMTM3Q96MX0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CMTM3Q96MX0 PMS2P7-201ENST00000506558 1336 ntBASIC13.64□□□□□ -0.23
CMTM3Q96MX0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms