Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 SPDYE17-201ENST00000412399 783 ntBASIC16.76■□□□□ 0.27
TRIM11Q96F44 BX842568.4-201ENST00000421222 227 ntBASIC16.76■□□□□ 0.27
TRIM11Q96F44 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 AC009093.7-201ENST00000623853 1223 ntBASIC16.76■□□□□ 0.27
TRIM11Q96F44 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 AZGP1P1-201ENST00000411909 902 ntBASIC16.75■□□□□ 0.27
TRIM11Q96F44 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 BANF1P1-201ENST00000553684 263 ntBASIC16.75■□□□□ 0.27
TRIM11Q96F44 AC093520.2-201ENST00000561830 333 ntBASIC16.75■□□□□ 0.27
TRIM11Q96F44 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 AC003101.2-201ENST00000612557 442 ntBASIC16.75■□□□□ 0.27
TRIM11Q96F44 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM11Q96F44 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM11Q96F44 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 AC138035.3-201ENST00000622706 2791 ntBASIC16.74■□□□□ 0.27
TRIM11Q96F44 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM11Q96F44 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM11Q96F44 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms